CDE Detailed Report
Disease: system
Subdomain Name: Laboratory Tests and Biospecimens%2FBiomarkers
CRF: files
Displaying 51 - 79 of 79
Subdomain Name: Laboratory Tests and Biospecimens%2FBiomarkers
CRF: files
Displaying 51 - 79 of 79
| CDE ID | CDE Name | Variable Name | Definition | Short Description | Question Text | Permissible Values | Description | Data Type | Disease Specific Instructions | Disease Specific Reference | Population | Classification (e.g., Core) | Version Number | Version Date | CRF Name (CRF Module / Guidance) | Subdomain Name | Domain Name | Size | Input Restrictions | Min Value | Max Value | Measurement Type | External Id Loinc | External Id Snomed | External Id caDSR | External Id CDISC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C58720 | Collection time mortality status indicator | CollTimeMortStatInd | Indicate whether the participant/subject is living or deceased at the time of specimen collection | Indicate whether the participant/subject is living or deceased at the time of specimen collection | Living or Deceased at time of collection | Living;Deceased | Living;Deceased | Alphanumeric |
Choose one |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2020-05-07 11:26:15.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C55325 | Specimen convalescent collected indicator | SpcmnConvalesCollectInd | Indicator of whether or not convalescent samples were collected | Indicator of whether or not convalescent samples were collected | Convalescent samples collected: | No;Yes;Unknown | No;Yes;Unknown | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 3.00 | 2013-07-22 16:57:17.79 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C58741 | Specimen shipped indicator | SpcmnShipdInd | Indicate whether the specimen was shipped | Indicate whether the specimen was shipped | Sample shipped | No;Yes;Unknown | No;Yes;Unknown | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2020-05-08 15:00:21.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C55348 | Device model number | DevModelNum | The model number for the device used | The model number for the device used | Model #: | Numeric Values |
For cerebral microdialysis specimens |
No references available | Adult;Pediatric | Exploratory | 3.00 | 2013-08-28 16:08:00.453 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Free-Form Entry |
||||||||||
| C58752 | Specimen expiration not applicable indicator | SpcmnExprtnNAInd | Indicate whether there is no expiration date for the specimen | Indicate whether there is no expiration date for the specimen | Date of sample expiration | N/A - no expiration | N/A - no expiration | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2020-05-08 16:59:56.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C54750 | Cerebrospinal fluid collection method other text | CSFCollectMethoOTH | The free-text field related to other for method related to cerebrospinal fluid (CSF) being collected | The free-text field related to other for method related to cerebrospinal fluid (CSF) being collecte | Other, specify | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental | 1.00 | 2017-04-11 12:19:20.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
|||||||||
| C55746 | Specimen surround dry ice shipment indicator | SpcmnSurrndDryIceShipInd | The indicator related to whether the specimen was surrounded by dry ice for shipping | The indicator related to whether the specimen was surrounded by dry ice for shipping | Samples surrounded by dry ice to maintain temperature -80C or below throughout shipment: | No;Yes | No;Yes | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 3.00 | 2013-07-22 16:57:17.79 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C58721 | Lab specimen type other text | LabSpecmnTypOTH | The free-text field related to 'Lab specimen type' specifying other text | The free-text field related to 'Lab specimen type' specifying other text | Other, specify | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental | 1.00 | 2020-05-07 12:40:28.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
|||||||||
| C55327 | Specimen serial collected indicator | SampleSerialCollectInd | Indicator of whether or not serial samples were collected over time | Indicator of whether or not serial samples were collected over time | Serial specimens collected (over time): | No;Yes;Unknown | No;Yes;Unknown | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 3.00 | 2013-07-22 16:57:17.79 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C58742 | Shipping conditions type | ShipCondTyp | Indicate the specimen shipping conditions | Indicate the specimen shipping conditions | Shipping conditions | Dry ice;Overnight;Other, specify | Dry ice;Overnight;Other, specify | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2020-05-08 15:03:28.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Multiple Pre-Defined Values Selected |
||||||||
| C55349 | Microdialysis cerebral Ictus monitoring interval | MicrodCrbrlIctusMonitorIntrvl | The period of time elapsed between ictus and monitoring for cerebral microdialysis | The period of time elapsed between ictus and monitoring for cerebral microdialysis | Time from ictus to monitoring: | Numeric Values |
For cerebral microdialysis specimens |
No references available | Adult;Pediatric | Exploratory | 1.00 | 2017-04-12 17:44:54.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Free-Form Entry |
||||||||||
| C58753 | Specimen analysis date and time | SpcmnAnlysisDateTime | Date (and time if applicable and known) when the specimen was analyzed | Date (and time if applicable and known) when the specimen was analyzed | Date and time of analysis | Date or Date & Time |
Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.). |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2020-05-08 17:04:31.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Free-Form Entry |
||||||||||
| C54751 | Cerebrospinal fluid collection anatomic site | CSFCollectAnatSite | The anatomic site related to collection of cerebrospinal fluid (CSF) | The anatomic site related to collection of cerebrospinal fluid (CSF | Site of CSF acquisition | Ventricular cistern;Lumbar cistern;Other, specify | Ventricular cistern;Lumbar cistern;Other, specify | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2017-04-11 12:19:20.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C55747 | Specimen insulate shipment box indicator | SpcmnInsulateShipBoxInd | The indicator related to whether the specimen insulated in a shipment box | The indicator related to whether the specimen insulated in a shipment box | Use insulated bio-shipment box: | No;Yes | No;Yes | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 3.00 | 2013-07-22 16:57:17.79 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C58722 | Specimen collection position type | SpcmnCollectPosTyp | Indicate the position of the participant/subject during sample collection | Indicate the position of the participant/subject during sample collection | Patient position during sample collection | Seating;Lying;Standing | Seating;Lying;Standing | Alphanumeric |
Choose one |
No references available | Adult;Pediatric | Supplemental | 1.00 | 2020-05-07 14:12:41.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C55329 | Specimen storage barcode system used indicator | SpecStrgBarcdSysUsedInd | The indicator related to whether a specimen storage barcode system was used | The indicator related to whether a specimen storage barcode system was used | Samples torage bar code system (automated date/time) method used: | No;Yes;Unknown | No;Yes;Unknown | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 3.00 | 2013-07-24 11:38:01.2 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C58743 | Shipping conditions type other text | ShipCondOTH | The free-text field related to other shipping conditions type | The free-text field related to other shipping conditions typ | Other, specify | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental | 1.00 | 2020-05-08 15:29:37.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
|||||||||
| C55352 | Microdialysate source type | MicrodiaSourcTyp | The free-text field to specify the type of microdialysate specimen source | The free-text field to specify the type of microdialysate specimen source | Composition and source of the microdialysate: | Alphanumeric |
For cerebral microdialysis specimens |
No references available | Adult;Pediatric | Exploratory | 3.00 | 2013-07-24 11:38:01.2 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
|||||||||
| C58754 | Multiplex platform statistical methodology type | MultiplxPlatStatMethdTyp | Indicate the statistical methodology used to address multiple hypothesis testing | Indicate the statistical methodology used to address multiple hypothesis testing | Statistical methodology used to address multiple hypothesis testing | Alphanumeric |
For multiplex platforms (proteomics, metabolomics, luminex assays) |
No references available | Adult;Pediatric | Supplemental | 1.00 | 2020-05-11 11:25:52.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
|||||||||
| C54752 | Cerebrospinal fluid collection anatomic site other text | CSFCollectAnatSiteOTH | The free-text field related to other anatomic site related to collection of cerebrospinal fluid (CSF) | The free-text field related to other anatomic site related to collection of cerebrospinal fluid (CSF | Other, specify | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental | 1.00 | 2017-04-11 12:19:20.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
|||||||||
| C56123 | Specimen centrifugation performed indicator | SpecCentrifPerfrmdInd | The indicator relating to whether centrifugation was performed on the specimen | The indicator relating to whether centrifugation was performed on the specime | Sample centrifuged | No;Yes;Unknown | No;Yes;Unknown | Alphanumeric | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2017-06-06 13:23:19.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||||
| C58723 | Blood collection method type other text | BldCollMthdTypOTH | The free-text field related to 'Blood collection method type' specifying other text | The free-text field related to 'Blood collection method type' specifying other text | Other, specify | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental | 1.00 | 2020-05-07 16:39:23.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 255 |
Free-Form Entry |
|||||||||
| C55338 | Specimen freeze thaw cycle prior biomarker assay number | SpcmnFrzThwCycPriorBiomAssaNum | The number of freeze thaw cycles the sample underwent prior to the biomarker assay | The number of freeze thaw cycles the sample underwent prior to the biomarker assay | Number of freeze/thaw cycles the sample went through prior to biomarker assay: | Numeric Values |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 3.00 | 2013-07-22 16:57:17.79 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Free-Form Entry |
||||||||||
| C58744 | Specimen ambient light protection indicator | SpcmnAmbntLightProtectInd | Indicate whether the specimen was protected from ambient light | Indicate whether the specimen was protected from ambient light | Sample protected from ambient light | No;Yes;Unknown | No;Yes;Unknown | Alphanumeric |
No instructions available |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 1.00 | 2020-05-08 15:33:27.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
||||||||
| C01705 | Lab test name | LabTestName | Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions | Name representing the lab test performed on body fluid(s) and tissues. Test names are typically comprised of the analyte name, properties (%, Ratio, etc.), the type of body fluid tested, and any special instructions | Laboratory test(s) conducted | Glucose;Immunoglobulin G (IgG);Oligoclonal Bands;Other, specify | Glucose;Immunoglobulin G (IgG);Oligoclonal Bands;Other, specify | Alphanumeric |
"Indicate the name of each laboratory test that is run on the specimen. Refer to the document entitled, ""Laboratory Tests Permissible Values for Stroke"" for a listing and description of the recommended lab tests." |
No references available | Adult;Pediatric | Supplemental-Highly Recommended | 4.00 | 2024-03-18 15:21:17.0 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Single Pre-Defined Value Selected |
2003746 | |||||||
| C55353 | Microdialysate composition type text | MicrodiaCompTypTxt | The free-text field to specify the composition of microdialysate specimen | The free-text field to specify the composition of microdialysate specimen | Composition and source of the microdialysate: | Alphanumeric |
For cerebral microdialysis specimens |
No references available | Adult;Pediatric | Exploratory | 3.00 | 2013-07-24 11:38:01.2 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations | 500 |
Free-Form Entry |
|||||||||
| C01701 | Lab specimen collection date and time | LabSpecmnCollDateTime | Date (and time if applicable and known) when the specimen was collected | Date (and time if applicable and known) when the specimen was collected | Date and time of sample collection | Date or Date & Time |
Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.). |
A Consensus Protocol for the Standardization of Cerebrospinal Fluid Collection and Biobanking; Teunissen, C.E., Neurology 2009; 73: 1914-1922. | Adult;Pediatric | Supplemental-Highly Recommended | 3.00 | 2013-07-25 08:54:08.2 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Free-Form Entry |
2004004 | |||||||||
| C10821 | Food last consumed date and time | FoodLstConsmDateTime | Date (and time, if applicable and known) the participant/subject last ate food | Date (and time, if applicable and known) the participant/subject last ate food | Date and time last ate | Date or Date & Time |
Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.). |
HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples; Rai, A.J., Proteomics 2005, 5, 3262-3277. | Adult;Pediatric | Supplemental | 3.00 | 2013-07-22 16:57:17.79 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Free-Form Entry |
||||||||||
| C10823 | Alcohol last consumed date and time | AlcohLastConDateTime | Date (and time, if applicable and known) the participant/subject last drank alcohol | Date (and time, if applicable and known) the participant/subject last drank alcohol | Date last had an alcoholic drink | Date or Date & Time |
Record the date/time according to the ISO 8601, the International Standard for the representation of dates and times (http://www.iso.org/iso/home.html). The date/time should be recorded to the level of granularity known (e.g., year, year and month, complete date plus hours and minutes, etc.). |
No references available | Adult;Pediatric | Supplemental | 3.00 | 2013-07-22 16:57:17.79 | Biospecimen Collection and Processing | Laboratory Tests and Biospecimens%2FBiomarkers | Assessments and Examinations |
Free-Form Entry |
